{
  "checked": "2026-11-09",
  "repository": "https://github.com/victoria-mochulska/cycles_upon_cycles",
  "revision": "c8942dd1aeeea790e2cb141662b9ef235756d2c4",
  "sample": "20200815 P1",
  "temperature_C": 27,
  "experimental_batch": 1,
  "registration": "Center of mass",
  "time_step_min": 10,
  "space_step_um": 1.38,
  "calibration_basis": "PNAS Methods and repository SVD_analysis/src/data_settings.py (TE_27C_14ss; 20200815 P1).",
  "notes": [
    "These are processed 2D numeric kymographs, not raw imaging stacks.",
    "Rows are space; columns are time. The absolute time origin, crop and registration must be preserved when comparing.",
    "TIFF finterval=1 is not the physical cadence; use the documented 10 min/sample.",
    "This pair has not been identified as the exact representative sample shown in Figure 2.",
    "Repository Read me has a 6h folder-name discrepancy and a 24h batch discrepancy; neither changes this 27C batch1 sample.",
    "Only this pair has been decoded. A repository file count is not a biological replicate count."
  ],
  "files": [
    {
      "path": "2026_PNAS_CyclesUponCycles_intensityPhaseKymographs/batch1_chronic_27C/intensityKymo/Kymo_20200815_P1.tif",
      "bytes": 68273,
      "git_blob": "b97b816b3cbf7c55df0aa9c671057ad72b1e87d1",
      "sha256": "5d615be397563026e89acf6c030eef61980256ba5686a41a52633bfd4108ea1b",
      "url": "https://raw.githubusercontent.com/victoria-mochulska/cycles_upon_cycles/c8942dd1aeeea790e2cb141662b9ef235756d2c4/2026_PNAS_CyclesUponCycles_intensityPhaseKymographs/batch1_chronic_27C/intensityKymo/Kymo_20200815_P1.tif",
      "verified": true,
      "local_file": "Kymo_20200815_P1.tif",
      "shape_space_time": [
        279,
        119
      ],
      "dtype": "uint16",
      "compression": "none",
      "finite_count": 33201,
      "nan_count": 0,
      "infinite_count": 0,
      "min_finite": 6561,
      "max_finite": 33060,
      "zero_count": 0,
      "at_uint16_max": 0,
      "tiff_description": "ImageJ=1.53g\nunit=micron\nfinterval=1\nmin=2444.0\nmax=65535.0\n",
      "tiff_resolution": [
        [
          0.142857
        ],
        [
          0.72266
        ]
      ]
    },
    {
      "path": "2026_PNAS_CyclesUponCycles_intensityPhaseKymographs/batch1_chronic_27C/phaseKymo/phase_Kymo_20200815_P1.tif",
      "bytes": 133072,
      "git_blob": "87266b9b18220ff817ce882edff3a0227a8131a9",
      "sha256": "83802c8a098cb59acfeaea14ce6cb199c677cad0134d0273e95cb079a7de4fa0",
      "url": "https://raw.githubusercontent.com/victoria-mochulska/cycles_upon_cycles/c8942dd1aeeea790e2cb141662b9ef235756d2c4/2026_PNAS_CyclesUponCycles_intensityPhaseKymographs/batch1_chronic_27C/phaseKymo/phase_Kymo_20200815_P1.tif",
      "verified": true,
      "local_file": "phase_Kymo_20200815_P1.tif",
      "shape_space_time": [
        279,
        119
      ],
      "dtype": "float32",
      "compression": "none",
      "finite_count": 33201,
      "nan_count": 0,
      "infinite_count": 0,
      "min_finite": -3.1413745880126953,
      "max_finite": 3.1414635181427,
      "zero_count": 0,
      "at_uint16_max": null,
      "tiff_description": "{\"shape\": [279, 119]}",
      "tiff_resolution": [
        null,
        null
      ]
    }
  ]
}
